MetaChemiBio

Toxic compounds
ACToR Judson R. S., Martin M. T., Egeghy P., Gangwal S., Reif D. M., Kothiya P., Wolf M., Cathey T., Transue T., Smith D., Vail J., Frame A., Mosher S., Cohen Hubal E. A., Richard A. M., Aggregating data for computational toxicology applications: The U.S. Environmental Protection Agency (EPA) Aggregated Computational Toxicology Resource (ACToR) system. International Journal of Molecular Sciences, 2012, 13, 1805-1831. Abstract
ADReCS-Target Huang L.-H., He Q.-S., Liu K., Cheng J., Zhong M.-D., Chen L.-S., Yao L.-X., Ji Z.-L., ADReCS-Target: target profiles for aiding drug safety research and application. Nucleic Acids Research, 2018, 46, D911–D917. Abstract
Alanwood.net pesticides Provided by Alan Wood
ATSDR Hayes A., Chemical compendia. in: Wexler P. (Editor) "Information resources in toxicology (Fourth edition)”. Elsevier Inc., 2009, pp. 123-128. Abstract
CCRIS Provider: US National Library of Medicine
ChemDIS Tung C.-W., ChemDIS: a chemical–disease inference system based on chemical–protein interactions. Journal of Cheminformatics, 2015, 7, Article No 25. Abstract
CompTox Williams A. J., Grulke C. M., Edwards J., McEachran A. D., Mansouri K., Baker N. C.,  Patlewicz G., Shah I., Wambaugh J. F., Judson R. S., Richard A. M., The CompTox Chemistry Dashboard: a community data resource for environmental chemistry. Journal of Cheminformatics, 2017, 9, Article No 61. Abstract
Contaminant.db Provider: University of Alberta
CPDB Fitzpatrick R. B., CPDB: Carcinogenic potency database. Medical Reference Services Quarterly, 2008, 27, 303-311. Abstract
CREST Provider: Brunel University London
CTD Chemicals Davis A. P., Grondin C. J., Johnson R. J., Sciaky D., McMorran R., Wiegers J., Wiegers T. C. Mattingly C. J., The Comparative Toxicogenomics Database: update 2019. Nucleic Acids Research, 2019, 47, D948–D954. Abstract
DART Ji Z. L., Han L. Y., Yap C. W., Sun L. Z., Chen X., Chen Y. Z., DART: Drug Adverse Reaction Target Database. Drug Safety, 2003, 26, 685-690. Abstract
diXa Hendrickx D M., Aerts H. J. W. L., Caiment F., Clark D., Ebbels T. M. D., Evelo C. T., Gmuender H., Dennie G.A.J. Hebels D. G. A. J., Herwig R., Hescheler J., Jennen D. G. J., Jetten M. J. A., Kanterakis S., Keun H. C., Matser V., Overington J. P., Pilicheva E., Sarkans U., Segura-Lepe M. P., Sotiriadou I., Wittenberger T., Wittwehr C., Zanzi A., Kleinjans J. C. S., diXa: a data infrastructure for chemical safety assessment. Bioinformatics, 2015, 31, 1505–1507. Abstract
e-Baza izomerów trans Provider: Instytut Żywności i Żywienia
ECHA Provider: European Chemicals Agency
eChemPortal Provider: OECD
ECOTOX Provider: US Environmental Protection Agency
EDCs DataBank Montes-Grajales D., Olivero-Verbel J., 2015, EDCs DataBank: 3D-Structure database of endocrine disrupting chemicals. Toxicology, 2015, 327, 87–94. Abstract
EKDB Ding D., Xu L., Fang H., Hong H., Perkins R., Harris S., Bearden E. D., Shi L., Tong W., The EDKB: An established knowledge base for endocrine disrupting chemicals. BMC Bioinformatics, 2010, 11 (Suppl. 6), Article No S5. Abstract
EPA DSSTox Provider: US Environmental Protection Agency
eTOX Library Cases M., Pastor M., Sanz F., 2013, The eTOX Library of public resources for in silico toxicity prediction. Molecular Informatics, 2013, 32, 24–35. Abstract
Exposome-Explorer Neveu V., Moussy A., Rouaix H., Wedekind R., Pon A., Knox C., Wishart D. S., Scalbert A., Exposome-Explorer: a manually-curated database on biomarkers of exposure to dietary and environmental factors. Nucleic Acids Research, 2017, 45, D979–D984. Abstract
EXTOXNET Providers: University of California-Davis, Oregon State University, Michigan State University, Cornell University, University of Idaho
GENETOX Provider: US National Library of Medicine
HERA
IRIS Provider: US Environmental Protection Agency
ITER Tomasulo P., ITER-International Toxicity Estimates for Risk, new TOXNET® database. Medical Reference Services Quarterly, 2005, 24, 55-66. Abstract
IUPAC Agrochemicals
KEGG BRITE Kanehisa M., Sato Y., Furumichi M., Morishima K., Tanabe M., New approach for understanding genome variations in KEGG. Nucleic Acids Research, 2019, 47, D590–D595. Abstract
KemI N-class Providers: Nordic Council of Ministers; European Chemicals Bureau
KemI Riskline Provider: Swedish Chemicals Agency
LiverTox Provider: National Institutes of Health
LTKB Chen M. J., Vijay V., Shi Q., Liu Z. C., Fang H., Tong W. D., FDA-approved drug labeling for the study of drug-induced liver injury. Drug Discovery Today, 2011, 16, 697-703. Abstract
MetaADEDB Cheng F., Li W., Wang Y., Zhou Y., Wu Z., Shen J., Tang Y., Adverse Drug Events: database construction and in silico prediction. Journal of Chemical Information and Modeling, 2013, 53, 744-752. Abstract
NPIC
NTP databases
OpenFoodTox Dorne J. L., Richardson J., Kass G., Georgiadis N., Monguidi M., Pasinato L., Cappe S., Verhagen H., Robinson T., Editorial: OpenFoodTox: EFSA’s open source toxicological database on chemical hazards in food and feed. EFSA Journal, 2017, 15, Article No e15011. Abstract
Open TG-Gates Igarashi Y., Nakatsu N., Yamashita T., Ono A., Ohno Y., Urushidani T. Yamada H., Open TG-GATEs: a large-scale toxicogenomics database. Nucleic Acids Research, 2015, 43, D921–D927. Abstract
PAN Pesticide Provider: Pesticide Action Network
Pesticide Properties Database Heller S. R., Scott K., Bigwood D. W., Need for data evaluation of physical and chemical properties of pesticides: The ARS pesticide properties database. Journal of Chemical Information and Computer Sciences, 1989, 29, 159-162. Abstract
PFPŻ zanieczyszczenia chemiczne Provider: Polska Federacja Producentów Żywności
SkinSensDB Wang C.-C., Lin Y.-C., Wang S.-S., Shih C., Lin Y.-H., Tung C.-W., SkinSensDB: a curated database for skin sensitization assays. Journal of Cheminformatics, 2017, 9, Article No 5. Abstract
SuperToxic Schmidt U., Struci S., Gruening B., Hossach J., Jaeger I.S., Parol R., Lindequist U., Teuscher E., Preissner R., SuperToxic: comprehensive database of toxic compounds. Nucleic Acids Research, 2009, 37, D295-D299. Abstract
T3DB Wishart D., Arndt D., Pon A., Sajed T., Guo A. C., Djoumbou Y., Knox C., Wilson M., Liang Y., Grant J., Liu Y., Goldansaz S. A., Rappaport S. M., T3DB: the toxic exposome database. Nucleic Acids Research, 2015, 43, D928–D934. Abstract
ToxBank Authors: Barry Hardy, David Bower, Egon Willighagen, Glenn Myatt, Matthew Clark, Micha Rautenberg
ToxDB Hardt C., Beber M. E., Rasche A., Kamburov A., Hebels D. G., Kleinjans J. C., Herwig R., ToxDB: pathway-level interpretation of drug-treatment data. Database, 2016, Article No baw052. Abstract
TOXNET Fowler S., Schnall J. G., TOXNET: Information on toxicology and environmental health. American Journal of Nursing, 2014, 114, 61-63. Abstract
ToxRefDB Martin M. T., Mendez E., Corum D. G., Judson R. S., Kavlock R. J., Rotroff D. M., Dix D. J., Profiling the reproductive toxicity of chemicals from multigeneration studies in the toxicity reference database. Toxicological Sciences, 2009, 110, 181-190. Abstract
Toxygates Nyström-Persson J., Igarashi Y., Ito M., Morita M., Nakatsu N., Yamada H., Mizuguchi K., 2013, Toxygates: interactive toxicity analysis on a hybrid microarray and linked data platform. Bioinformatics, 2013, 29, 3080-3086. Abstract
WITHDRAWN Siramshetty V. B., Nickel J., Omieczynski C., Gohlke B.-O., Drwal M. N., Preissner R., WITHDRAWN-a resource for withdrawn and discontinued drugs. Nucleic Acids Research, 2016, 44, D1080–D1086. Abstract
WHO Food Safety
Last Updated on Friday, 01 February 2019 08:05